Package: SuperCell
Type: Package
Title: Simplification of scRNA-seq data by merging together similar
        cells
Version: 1.0
Author: Mariia Bilous
Maintainer: The package maintainer <mariia.bilous@unil.ch>
Description: Aggregates large single-cell data into metacell dataset by
        merging together gene expression of very similar cells.
License: file LICENSE
Encoding: UTF-8
LazyData: true
LazyDataCompression: xz
biocViews: Software
Imports: igraph, RANN, WeightedCluster, corpcor, weights, Hmisc,
        Matrix, matrixStats, plyr, irlba, grDevices, patchwork, gtools,
        ggplot2, umap, entropy, Rtsne, bluster, dbscan, cowplot,
        scales, plotfunctions, proxy, methods, rlang,
RoxygenNote: 7.2.3
Suggests: SingleCellExperiment, SummarizedExperiment, scater, Seurat,
        knitr, rmarkdown, remotes, velocyto.R, testthat (>= 3.0.0)
Depends: R (>= 3.5.0)
VignetteBuilder: knitr
Config/testthat/edition: 3
Config/pak/sysreqs: cmake libglpk-dev make libicu-dev libpng-dev
        libuv1-dev libxml2-dev libssl-dev python3 libx11-dev zlib1g-dev
Repository: https://gfellerlab.r-universe.dev
Date/Publication: 2026-02-19 11:08:12 UTC
RemoteUrl: https://github.com/gfellerlab/supercell
RemoteRef: HEAD
RemoteSha: f0a041e92a611dba650f0ab1f37d7075ff25f6e9
NeedsCompilation: no
Packaged: 2026-06-20 10:43:18 UTC; root